PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004864.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 192aa    MW: 20801.5 Da    PI: 10.9341
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.9e-2162111255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  XP_023004864.1  62 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 111
                     69*******.**********32....25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MISDQPIDSL YRAFFQTQFS QSPPPDSQLD GIAAVVGRKV LFGDIPPSTS GSKAPAVTGQ  60
KSYRGVRKRP WGRWSAEIRD RIGRCRHWLG TFDTAEEAAR AYDAAARRLR GSKARTNFEM  120
PLVVPLESTS SSSTSSVEGK RNGNNGNKLK AVKKPSGRKC AVVTTAAHLF SRGMELDLKL  180
GVDFVNGGQS AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.16e-29ERF family protein