PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023004869.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 325aa    MW: 35997.3 Da    PI: 8.8064
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023004869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.43e-14260305655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er+RR ri +++ +L+el P      +k  sKae+Le+AveYIk Lq
  XP_023004869.1 260 SIAERNRRTRISERMKKLQELFPDM----DKQTSKAEMLELAVEYIKGLQ 305
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MEDWVLLIIW VSSDFRFLGF GISSNSLEAY PDFMDRDSTN IHSAGGLMRY WSAPTSVFAN  60
LLDGTEGLLL SNNGGGGGGG GGSGAEDYRV IRSTSPVVVN RSCSMVNRSL VNCGVGAQTG  120
NSLGVMNLNN SMQFDLGARN AGNLFRQSSS PAVGVFSHLT AENGNTTRQY DDDFLNSSWH  180
NSAIKDLKRG RDNNGRTFPT SIVLETQNAG YENNNRGLAH HLSFPITFNN DPVEKFFRFQ  240
EHPIRHQIRA KRGCATHPRS IAERNRRTRI SERMKKLQEL FPDMDKQTSK AEMLELAVEY  300
IKGLQRQVKT LTDTNAKCAC LCSSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.18e-42bHLH family protein