PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023004880.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 358aa MW: 40102 Da PI: 7.0389

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023004880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	49.9	6.9e-16	111	166	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelm..kvkgLtlehvkSHLQkYRl 55 k+rl WtpeLH++F+e ++ +ek +Pk+ile m k + +t+e+v+SHLQk+Rl XP_023004880.1 111 KERLIWTPELHQCFLEYYNKF-PNEKRVPKKILEEMrrKFPYVTRENVASHLQKHRL 166 68*****************.999*******333568************8 PP
2	Myb_DNA-binding	28.5	3.6e-09	113	165	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg...kgRtlkqcksrwqkyl 48 r+ WT+e+++ ++++ ++++++ +k+I ++m t++++ s++qk++ XP_023004880.1 113 RLIWTPELHQCFLEYYNKFPNEkrVPKKILEEMRrkfPYVTRENVASHLQKHR 165 667*****************************9996669999*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MDGRTDGGDD GIVMILPDFS DDVPSDGFDV HGGGADYIVQ PTAPNQPSKD NPSFVSPDVN 60 PVGVPHSSGD VDGRVTILPV IDDRTGRKTS LKAKSSKKKN GYYHRRNGEK KERLIWTPEL 120 HQCFLEYYNK FPNEKRVPKK ILEEMRRKFP YVTRENVASH LQKHRLYLKH SKNKEQGKLS 180 KPSTKSVPRK QINEEFNIHQ ILNNTVISTC PNAVLPHQSH SISINPNTQP PLQTHTLQEP 240 MQNQVFSQFD DTHLIEQDIV LIPSSFDPWN DLPYSNTMNV FDPFGGQSSN AASCFPVMVD 300 NFAPPMLSNH QLVISNIDCN GYGNDNGNSF HPMMGNTFGG LSINNYSNGA LQTFLIIT

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MDGRTDGGDD GIVMILPDFS DDVPSDGFDV HGGGADYIVQ PTAPNQPSKD NPSFVSPDVN  60
PVGVPHSSGD VDGRVTILPV IDDRTGRKTS LKAKSSKKKN GYYHRRNGEK KERLIWTPEL  120
HQCFLEYYNK FPNEKRVPKK ILEEMRRKFP YVTRENVASH LQKHRLYLKH SKNKEQGKLS  180
KPSTKSVPRK QINEEFNIHQ ILNNTVISTC PNAVLPHQSH SISINPNTQP PLQTHTLQEP  240
MQNQVFSQFD DTHLIEQDIV LIPSSFDPWN DLPYSNTMNV FDPFGGQSSN AASCFPVMVD  300
NFAPPMLSNH QLVISNIDCN GYGNDNGNSF HPMMGNTFGG LSINNYSNGA LQTFLIIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	3e-15	ARR-B family protein