PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023005056.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 290aa    MW: 32183.1 Da    PI: 5.8606
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023005056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.21.7e-28111171259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDg++WrKYGqK++ gs+fpr+Y+rC+++   gC+++k v+rs++dp++ eitY+g+H+++
  XP_023005056.1 111 DDGFSWRKYGQKDILGSKFPRGYFRCSHRfaqGCSATKLVQRSDNDPSMYEITYRGKHTCN 171
                     8***************************9999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEFVNLIQEL NQGRNLAHQL RDHLHPSLSS SSSSSSSSPS SNGILLIDQI LRSYENALSV  60
LAGGSGGGDE EIPPIIAAVK HRDVSKKRKV MAKWSELVKI PSVSAIGALP DDGFSWRKYG  120
QKDILGSKFP RGYFRCSHRF AQGCSATKLV QRSDNDPSMY EITYRGKHTC NKPLHSNTPK  180
QEQNPPQSQQ HPMPMPPKQE QEEPLQQQDV PLCLTVSSDN VDDSLRRPFC PLSPLFRSEV  240
EDAQSPFRGS ELEGLEFWCI GDGDLVSVPS SFTNISMGDL EEYCSLESFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-34WRKY family protein