PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005121.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 352aa MW: 38454.2 Da PI: 5.2051

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005121.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85	9.5e-27	45	139	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li++++ e+r+r g+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkik++e++ +++s+s ++ ++l+ XP_023005121.1 45 RWTRQEILVLIQGKKVAETRVRGGRaatlafgsaQLEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKDWESQIRDDSESFWVTRNDLR 139 8*******************76555666666699******************************************999999998888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MALQQLTLGP TPVHAVSDAV TNALDARPIS SDGGDNGSKT PRLPRWTRQE ILVLIQGKKV 60 AETRVRGGRA ATLAFGSAQL EPKWASVSSY CKRHGVNRGP VQCRKRWSNL AGDFKKIKDW 120 ESQIRDDSES FWVTRNDLRR ERKLPGFFDR EVYDILESGS APSPSPTLAL ALAPAPAPAP 180 PPPPPPPVPT LTSALNSDDA EPEHVFDSFK TAAADDGLFS DFEQDETSQS PIKEVPGKEA 240 PVPTLDEEIP APAPLSGTSN EREAAANPEI GSSLQEGRKR KRMAKEGEEE SMMVQDELIG 300 ILEKNGKLLT AQLEAQNMNF QLDREQRRYH ADGLVTVLNK LADALGRIAD KL

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MALQQLTLGP TPVHAVSDAV TNALDARPIS SDGGDNGSKT PRLPRWTRQE ILVLIQGKKV  60
AETRVRGGRA ATLAFGSAQL EPKWASVSSY CKRHGVNRGP VQCRKRWSNL AGDFKKIKDW  120
ESQIRDDSES FWVTRNDLRR ERKLPGFFDR EVYDILESGS APSPSPTLAL ALAPAPAPAP  180
PPPPPPPVPT LTSALNSDDA EPEHVFDSFK TAAADDGLFS DFEQDETSQS PIKEVPGKEA  240
PVPTLDEEIP APAPLSGTSN EREAAANPEI GSSLQEGRKR KRMAKEGEEE SMMVQDELIG  300
ILEKNGKLLT AQLEAQNMNF QLDREQRRYH ADGLVTVLNK LADALGRIAD KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-110	Trihelix family protein