PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023005129.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 241aa    MW: 27213.3 Da    PI: 8.6234
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023005129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3108.14.3e-3436140199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k ltpsdv+k++rlv+pk++ae++      g    ++  l++edesg+ W+++++y+++s++yvltkGW +Fvk+++L++gD+vvF++++r++
  XP_023005129.1  36 FEKPLTPSDVGKLNRLVIPKQYAEKYfplspgGDTADKGLLLSFEDESGKMWRFRYSYWNSSQSYVLTKGWTRFVKEKRLDAGDVVVFERHRRDG 130
                     99*****************************8666668999************************************************999999 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l++++ r+
  XP_023005129.1 131 DRLFIGWKRR 140
                     99****9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MSLNHFSSDC HLHHPKSSAS AVDHHLIHHH HKHPMFEKPL TPSDVGKLNR LVIPKQYAEK  60
YFPLSPGGDT ADKGLLLSFE DESGKMWRFR YSYWNSSQSY VLTKGWTRFV KEKRLDAGDV  120
VVFERHRRDG DRLFIGWKRR SPVSTAETAA ATRIFCSSNP YPSHHHHNHL PSPPYQSSDC  180
PRAESSVQSQ TVSVGNSKIV RLFGVDLECQ TDVSEPEQPS TIGGGSGLSG QDPTRHSFYT  240
H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.15e-64B3 family protein