PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005333.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 621aa MW: 68253.7 Da PI: 6.617

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.7	3.8e-12	450	495	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L +v YI++L XP_023005333.1 450 NHVEAERQRREKLNQKFYALRAVVPNV-----SKMDKASLLGDTVSYINEL 495 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 621 aa Download sequence
MTDYRFSTMN LWTDENASAM DAFTNSDLSS YWAPSAASSQ SLHHPPPTQS SASTTTPPSV 60 PSKSIAVLNQ ETLQQRLQAL IDGARESWTY AIFWQSSYDY SGGSVLGWGD GYYKGEENKG 120 RGKTKMVSSA AEQAHRKKVL RELNSLISGS ATGLDDVVDE EVTDTEWFFL VSMTQSFVNG 180 VGLPSQALLS SRPIWITGAD RLSASACDRA RQGRIFGLQT MVCIPLPNGV VEMGSTEAIY 240 ITTDLMNKVK TLFNFNNLET GSWQSGTTGV TVADEGENDP SSLWISEPSS TIEMKDSITT 300 TVLSGGASAK PIHSENPSSS SLTENASRKQ THSLNFPDYA AAAATTNPSF KSESGGMMSF 360 GNKSFFSGNS QNEKKKSPTS RRSTDEGILC FTTDAILPFF GKVKSGDSDH SDPEASAIPE 420 VDSCIKPSEP EKRPRKRGRK PANGREEPLN HVEAERQRRE KLNQKFYALR AVVPNVSKMD 480 KASLLGDTVS YINELKLKLE MAESKKTEIE KQLEFMKKDG GTGRKDIGNY TNTVNEDLKM 540 EIQVKVMGSD AMIRVECSKK NHPAARLMAA LKDLDLEMIH ASVSVVNDLM IQQAAVKMES 600 RVYTTEQLKM VLMAEVRRCR R

Sequence ? help Back to Top

Protein Sequence Length: 621 aa Download sequence

MTDYRFSTMN LWTDENASAM DAFTNSDLSS YWAPSAASSQ SLHHPPPTQS SASTTTPPSV  60
PSKSIAVLNQ ETLQQRLQAL IDGARESWTY AIFWQSSYDY SGGSVLGWGD GYYKGEENKG  120
RGKTKMVSSA AEQAHRKKVL RELNSLISGS ATGLDDVVDE EVTDTEWFFL VSMTQSFVNG  180
VGLPSQALLS SRPIWITGAD RLSASACDRA RQGRIFGLQT MVCIPLPNGV VEMGSTEAIY  240
ITTDLMNKVK TLFNFNNLET GSWQSGTTGV TVADEGENDP SSLWISEPSS TIEMKDSITT  300
TVLSGGASAK PIHSENPSSS SLTENASRKQ THSLNFPDYA AAAATTNPSF KSESGGMMSF  360
GNKSFFSGNS QNEKKKSPTS RRSTDEGILC FTTDAILPFF GKVKSGDSDH SDPEASAIPE  420
VDSCIKPSEP EKRPRKRGRK PANGREEPLN HVEAERQRRE KLNQKFYALR AVVPNVSKMD  480
KASLLGDTVS YINELKLKLE MAESKKTEIE KQLEFMKKDG GTGRKDIGNY TNTVNEDLKM  540
EIQVKVMGSD AMIRVECSKK NHPAARLMAA LKDLDLEMIH ASVSVVNDLM IQQAAVKMES  600
RVYTTEQLKM VLMAEVRRCR R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	432	440	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	1e-173	bHLH family protein