PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005379.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GATA

Protein Properties

Length: 523aa MW: 58978.9 Da PI: 6.1026

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	34.1	3.7e-11	28	54	9	35
GATA 9 TplWRrgpdgnktLCnaCGlyyrkkgl 35 TplWR+gp ++ LCnaCG ++r kg+ XP_023005379.1 28 TPLWRNGPPDKPVLCNACGSRWRTKGS 54 ******55555*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MFELISELHQ RKQSFSEAHI VSPCNAGTPL WRNGPPDKPV LCNACGSRWR TKGSLANYTP 60 LHARADPDEY DDKRLSRLKN SSMYKNKEVK LLKRKHYQDH EVVVGVIPDH AQSFHKAVDE 120 DTSNRSSSGS AISNSESCAQ FGGADGSDLT GPSQSTAWES MVPSRKRTCV DHPKSTAVEK 180 LTKDLYTILR EQQSYFSGSS EEDLLFESET PMVSVEIGHG SILMRHPSSI AREEESEASS 240 FSVDHKHFSV NEAYSESSIV PSTLGIGRKH SNGQAFLQEQ IKKDRPQLEK VQALGNHNSP 300 LCNIDLTVIL NFREFTKQLT CEDQRELMKY LPSVDTEELP DSLNSMFESP QFKENLNSFK 360 QLLTEGVFDF SFLGAKREDC KTLSRLVLWD LSKSKWVEQY DRLKKCSTSF VDDKRLLDAQ 420 NKKFSETRIT MMSPRRVTTK TSVESKELID DSCCFSPRSL FALPSDGSSF TLESLHFDED 480 SFDQDLLLDV RSNSSFPQAE LLSFGGEQAS NSSSSINLRL MHR

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MFELISELHQ RKQSFSEAHI VSPCNAGTPL WRNGPPDKPV LCNACGSRWR TKGSLANYTP  60
LHARADPDEY DDKRLSRLKN SSMYKNKEVK LLKRKHYQDH EVVVGVIPDH AQSFHKAVDE  120
DTSNRSSSGS AISNSESCAQ FGGADGSDLT GPSQSTAWES MVPSRKRTCV DHPKSTAVEK  180
LTKDLYTILR EQQSYFSGSS EEDLLFESET PMVSVEIGHG SILMRHPSSI AREEESEASS  240
FSVDHKHFSV NEAYSESSIV PSTLGIGRKH SNGQAFLQEQ IKKDRPQLEK VQALGNHNSP  300
LCNIDLTVIL NFREFTKQLT CEDQRELMKY LPSVDTEELP DSLNSMFESP QFKENLNSFK  360
QLLTEGVFDF SFLGAKREDC KTLSRLVLWD LSKSKWVEQY DRLKKCSTSF VDDKRLLDAQ  420
NKKFSETRIT MMSPRRVTTK TSVESKELID DSCCFSPRSL FALPSDGSSF TLESLHFDED  480
SFDQDLLLDV RSNSSFPQAE LLSFGGEQAS NSSSSINLRL MHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.2	1e-135	GATA family protein