PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005516.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-YB

Protein Properties

Length: 247aa MW: 27027.3 Da PI: 7.4044

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	169.9	2.9e-53	91	187	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqd+++Pianv+rim+++lP++akis+daket+qecvse+isf+t+ea+++cqre+rkt++++d+lwa+++lGf+dy+epl+v+l++yrele+ XP_023005516.1 91 VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTVFLNRYRELES 185 69********************************************************************************************9 PP NF-YB 96 ek 97 ++ XP_023005516.1 186 DR 187 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MECGGSAGGG DGFHSYKRQQ PKPTSGIFIS KIPLLPFASL NVLLTTNKSS FANNNHQQSN 60 GRNIAANSLM TGSTCASIAA TNNGKSQQCI VREQDQYMPI ANVIRIMRRI LPSHAKISDD 120 AKETIQECVS EYISFITGEA NERCQREQRK TVTAEDVLWA MGKLGFDDYI EPLTVFLNRY 180 RELESDRIRT EPILRRNVDY GPQVGMVPPY GQTFQIGHVP TGMFDAMGGY YDGGGNGGSS 240 SGNGSQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	4e-66	NF-YB family protein