PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023005563.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 197aa    MW: 21849.3 Da    PI: 10.0387
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023005563.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.52e-191968255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +gr++AeIrdp +   ++r++lg+f++ae+Aa+a+++a+  l+g
  XP_023005563.1 19 RYRGVRRRP-WGRFAAEIRDPLK---KTRVWLGTFDSAEDAARAYDNAAITLRG 68
                    7********.**********743...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MRXGRAAVRV APITGSERRY RGVRRRPWGR FAAEIRDPLK KTRVWLGTFD SAEDAARAYD  60
NAAITLRGPK AKTNFPLPTP TSFFDYPPPC PDRRFHTNPQ RPTPSTLSST VESFSGPRPP  120
SAAAATSASR RYPRTPPVVP EDCHSDCDSS SSVIDDGDIA SSSMIRRKYP LPFDLNIQPS  180
DHLDFGADDL RRTALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.11e-17ERF family protein