PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023005571.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 166aa    MW: 18241.3 Da    PI: 6.8832
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023005571.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.4e-171159255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykG+r ++ +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+g
  XP_023005571.1 11 HYKGIR-CR-SGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKG 59
                    7****9.55.6*********843...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MASTSSNKHH HYKGIRCRSG KWVSEIREPR KTTRIWLGTY PTPEMAAAAY DVAALALKGC  60
NAVLNFPDSI GSYPVPTSMS STDIRVAAAA AASKRIDHGE GSYNSHHQSP PTDEFVDEEA  120
LFGMPNLLVD MAEGMLLSPP RISSSPSRHE YYSWNSSGDG NLWSYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-39ERF family protein