PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005643.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 526aa MW: 58242.5 Da PI: 4.6658

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.5	2.4e-34	103	194	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+++++ed++l+ ++sw + g+sfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F++gk++ll++ XP_023005643.1 103 FLWKTFDLVEDPALDPIVSWGSAGQSFVVWDPVEFSRVILPSNFKHNNFSSFVRQLNTYGFRKIDADK---------WEFANDAFQRGKRHLLKN 188 99*************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_023005643.1 189 IQRRKS 194 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MNPLEEGDSV SPIGANSSSA QSDSDAPGVS SDPELMMSIG FSSSPTDGGS WTENPMPSSS 60 AHNLSDVIPK PDKGPSDPFS MWGSGTDVPQ PLEGLHGQLV PPFLWKTFDL VEDPALDPIV 120 SWGSAGQSFV VWDPVEFSRV ILPSNFKHNN FSSFVRQLNT YGFRKIDADK WEFANDAFQR 180 GKRHLLKNIQ RRKSPHSQQI GSLIGPSTGP GKSGLEDEIG RLKKERSMLM QEVVELQQEQ 240 KGTAQHVKTV NRRLQSAEQK QKQMISFLAK LLQNPEFLFR LQKKKEQRDI DSPRMKRKFV 300 KQHQHETDGF TPFMEGQIVK YQPDWGSLAT PELNPSLLEG PSAYLLQGVS GDLGSIPESM 360 SNFQYENDPS RDVITSEELA FHHGIVKPTE LSVEPSNMSM EDQHSKGKAI GSPSQDVNPD 420 YFVSLAESIQ QFSHLGTGNV IKPEEIWSTG LNVNTGTSSS NTELWSNPVD FEDPFLQGSS 480 RLSPFWDIGS LQAGDSHTTT WSASGFPFDD PDNRACPEKT DDSEDE

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MNPLEEGDSV SPIGANSSSA QSDSDAPGVS SDPELMMSIG FSSSPTDGGS WTENPMPSSS  60
AHNLSDVIPK PDKGPSDPFS MWGSGTDVPQ PLEGLHGQLV PPFLWKTFDL VEDPALDPIV  120
SWGSAGQSFV VWDPVEFSRV ILPSNFKHNN FSSFVRQLNT YGFRKIDADK WEFANDAFQR  180
GKRHLLKNIQ RRKSPHSQQI GSLIGPSTGP GKSGLEDEIG RLKKERSMLM QEVVELQQEQ  240
KGTAQHVKTV NRRLQSAEQK QKQMISFLAK LLQNPEFLFR LQKKKEQRDI DSPRMKRKFV  300
KQHQHETDGF TPFMEGQIVK YQPDWGSLAT PELNPSLLEG PSAYLLQGVS GDLGSIPESM  360
SNFQYENDPS RDVITSEELA FHHGIVKPTE LSVEPSNMSM EDQHSKGKAI GSPSQDVNPD  420
YFVSLAESIQ QFSHLGTGNV IKPEEIWSTG LNVNTGTSSS NTELWSNPVD FEDPFLQGSS  480
RLSPFWDIGS LQAGDSHTTT WSASGFPFDD PDNRACPEKT DDSEDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	2e-85	HSF family protein