PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023005692.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 318aa    MW: 35188.9 Da    PI: 8.7617
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023005692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA95.75.3e-30150206158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVNaKQy++I++RRq Rak+  +++  +++rkpy+heSRh hA+rRpRgsgGrF
  XP_023005692.1 150 DEPIYVNAKQYHGIIRRRQIRAKAMMKNRP-ARTRKPYIHESRHLHAMRRPRGSGGRF 206
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MAPQTGYLKE HEGIVPNSLG QLSSSPTRLW SAAFGLGSHS IFGDFGQVKE QLDSNGKEFA  60
ATKQTGHGLE KLNTAPFSIY PGDTKNSVGA QKPSPVFSLS EYHNHFELGF GQPLICENYP  120
YMEQHYGILS AYGPQIPGRV MLPMRLTTDD EPIYVNAKQY HGIIRRRQIR AKAMMKNRPA  180
RTRKPYIHES RHLHAMRRPR GSGGRFLNMK NQPNEKSSMV PKKVDDVNLS DLTGSQCSEV  240
LQSESGTLNS QNEAKEGRGF NLLSSEVSSM FSRGLQCFQI NHIGPSMQSL AEIIDGGGHG  300
MVLPKWVAAA ENCCDLCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.22e-55NF-YA family protein