PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005739.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 418aa MW: 45612.3 Da PI: 7.9815

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.8	5.9e-26	151	195	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ XP_023005739.1 151 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVET 195 79****************************************986 PP
2	QLQ	44.5	4.7e-16	79	113	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +F+aaQ q+L+ Q+l+++y++a++ vPpeLl i+ XP_023005739.1 79 YFSAAQRQELELQALIFRYMLAGAAVPPELLHTIK 113 7*****************************98886 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MDFHLKQCRE QEESEEQHSA KISKFFLQHP ESSVSSVSSD SSVLPLFVSD SNNSKTSSIL 60 SSFPDSTPSA NTLPRMWGYF SAAQRQELEL QALIFRYMLA GAAVPPELLH TIKKSLLSST 120 TPFFLHHPLQ HFPHYPTSLL QAGYWGRAAM DPEPGRCRRT DGKKWRCSRD VVAGQKYCER 180 HMHRGRNRSR KPVETATINP STTTSTAGAS GGGGGCSLSS NTNRVVGGGG RPFLAVESGN 240 YFSLSGQTPS VDLLHLNQRS CSDSLSEHKN FYESHKEAVA GDTKSDSHIL RHFFDDWPRS 300 NNNGSDNVTQ KMKSTSASTT SLSISIPENP SSSSDVSLKL STGGSSDQGV GHHIHQDGNS 360 EREHTHLNWA AGWAATQMAS MGGPLAEVLR STNNNSSPTS MLHQLQRATN SEASYIST

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MDFHLKQCRE QEESEEQHSA KISKFFLQHP ESSVSSVSSD SSVLPLFVSD SNNSKTSSIL  60
SSFPDSTPSA NTLPRMWGYF SAAQRQELEL QALIFRYMLA GAAVPPELLH TIKKSLLSST  120
TPFFLHHPLQ HFPHYPTSLL QAGYWGRAAM DPEPGRCRRT DGKKWRCSRD VVAGQKYCER  180
HMHRGRNRSR KPVETATINP STTTSTAGAS GGGGGCSLSS NTNRVVGGGG RPFLAVESGN  240
YFSLSGQTPS VDLLHLNQRS CSDSLSEHKN FYESHKEAVA GDTKSDSHIL RHFFDDWPRS  300
NNNGSDNVTQ KMKSTSASTT SLSISIPENP SSSSDVSLKL STGGSSDQGV GHHIHQDGNS  360
EREHTHLNWA AGWAATQMAS MGGPLAEVLR STNNNSSPTS MLHQLQRATN SEASYIST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	8e-56	GRF family protein