PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023005846.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 222aa MW: 26874.4 Da PI: 8.9439

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023005846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.6	1.4e-13	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W + Ed +l v+++G + W++Ia+ g+ R++k+c+ rw++yl XP_023005846.1 14 RGPWLEHEDRQLTMFVNRMGERKWDSIAKASGLERSGKSCRFRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	48.3	2.3e-15	71	112	5	48
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + eE+e++++++k++G++ W++Iar ++ gRt++++k++w+++l XP_023005846.1 71 SIEEEEIILKLHKKWGNK-WSRIARWLP-GRTDNEIKNYWRSHL 112 669*************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MATHSALHTE IQRRGPWLEH EDRQLTMFVN RMGERKWDSI AKASGLERSG KSCRFRWLNY 60 LRPNLKCDRI SIEEEEIILK LHKKWGNKWS RIARWLPGRT DNEIKNYWRS HLRKKFPIHL 120 EACKVKHGKQ DKLSLRHDQN ERDVPSYNHF GLSNLEITSS PYEIRLSNWI SNQLMNEKQE 180 VNHHEVCNSL EFCFYYPNMN YAHRVDQIDH FWDSFTPLWD IE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	1e-43	MYB family protein