PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023006009.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 238aa    MW: 25855.7 Da    PI: 7.8894
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023006009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26093.91.7e-294107199
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C ++p++     p++q++++ +++k++G++ +l+l++a p++ r+++++sl++eA+ r+ +P+yG++g+++++++ql+q 
  XP_023006009.1   4 SCNGCRVLRKGCSESCSIRPCLqwiktPQSQANATFFLAKFYGRAGLLNLINAGPDHLRPAIFKSLLFEACGRIVNPIYGSAGLLWSGSWQLCQD 98 
                     6********************************************************************************************** PP

          DUF260  91 kaelallke 99 
                     ++e++l ++
  XP_023006009.1  99 AVEAVLKGA 107
                     **9988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MRLSCNGCRV LRKGCSESCS IRPCLQWIKT PQSQANATFF LAKFYGRAGL LNLINAGPDH  60
LRPAIFKSLL FEACGRIVNP IYGSAGLLWS GSWQLCQDAV EAVLKGAPIL PVSSESAASH  120
MGPPLKGCDI RHVSRQQGSA PDSALQKIKT RRRLKRSAPN KPMPKEEPVV VTEFAFDDPT  180
RIVSEPRCLM FELDSWVGHK SQEKDGSSGS SDEAECLSVE GSAVEQVGDV ELELSLGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.13e-83LBD family protein