PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023006079.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 218aa    MW: 23701.7 Da    PI: 5.1695
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023006079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260114.66.4e-36201201100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+ap f  ++ +++fa+vhk+FGasnv+kll +lp + r++a+ +++yeA  r+rdP yG+v +i++lqq++++l++e+
  XP_023006079.1  20 SCGACKFLRRKCSDQCVFAPLFSYDEaTSHFAAVHKVFGASNVSKLLLHLPMHVRSQAAITVTYEALERMRDPAYGCVLHIFALQQEVASLQEEI 114
                     6**********************98868******************************************************************* PP

          DUF260  95 allkee 100
                     + l+++
  XP_023006079.1 115 QILGTQ 120
                     998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MAVLNSFDSS SSSSSSSSSS CGACKFLRRK CSDQCVFAPL FSYDEATSHF AAVHKVFGAS  60
NVSKLLLHLP MHVRSQAAIT VTYEALERMR DPAYGCVLHI FALQQEVASL QEEIQILGTQ  120
IANLLTTGAA ISAVENPFIE MNDFGMNSNH CQNELPSQLL PYQTCDDAQK DDPMISPLLC  180
LGEKDGGFGF CHSNHVVHTS GFHVSVDENF GGYPWILG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.18e-55LBD family protein