PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006207.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 650aa MW: 72295.2 Da PI: 6.1553

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	86.6	2.5e-27	213	266	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gL++e+v+SHLQkYRl XP_023006207.1 213 KPRVVWSVELHQQFVIAVDQL-GIDKAVPKKILELMNVPGLSRENVASHLQKYRL 266 79*****************.******************************8 PP
2	Myb_DNA-binding	35.9	1.7e-11	215	265	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av qlG + +k+I + m+ g++++++ s++qky+ XP_023006207.1 215 RVVWSVELHQQFVIAVDQLGIDkaVPKKILELMNvPGLSRENVASHLQKYR 265 678***********************************************7 PP
3	Response_reg	72.5	1.7e-24	35	143	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l++ y v+ + +e al +l+e++ +D++l D+ mp+mdG++ll++ e +lp+i+++a + ++ + + + G XP_023006207.1 35 VLVVDDDPTCLRILEKMLQNCCY-AVTKCNRAEIALSMLRENKngFDIVLSDVHMPDMDGFKLLEQVGLEM-DLPVIMMSADDGKNVVMKGVIHG 127 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l++ XP_023006207.1 128 ACDYLIKPVRIEALRN 143 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MDPIHTKGTM PTSTSISARK TADMGCDQFP AGLRVLVVDD DPTCLRILEK MLQNCCYAVT 60 KCNRAEIALS MLRENKNGFD IVLSDVHMPD MDGFKLLEQV GLEMDLPVIM MSADDGKNVV 120 MKGVIHGACD YLIKPVRIEA LRNIWQHVVR KRKSEWKDLE QSGSMDDGDR DQNLSEGANY 180 SSSAYDGSWN SSKRKRDAEE ELEERDDTST LKKPRVVWSV ELHQQFVIAV DQLGIDKAVP 240 KKILELMNVP GLSRENVASH LQKYRLYLRR LSGVSPHPSN LNNAFMNPQD HPPFGSMASY 300 NGIDLQTLLV TGQLSPQSLA ALQATGLRRP TAKSSLPMAL VDQTNIFSFE NPKLRFGEDQ 360 TQHLNKTKPA SLFHGIPTKM EPKQLANMQH PSVQTQRNMN MPLNIKSEHG GTQLMHLSQQ 420 QTVGQTLNNS TVSHLPGIPS TLRNPIISGS ITTGNGTADN SHGPRYNLVS PTSVMVNYPM 480 SQTTEVFQEE MNSNLKVSSG VMRYDVFSDL HMQKAHDWDY QNVSTLAFGT PHHGNFIHHS 540 FDISPSSLIH HGFPSSQTNG ENHNSSVNGK TNFPFLDSTQ PGIPQSVAQN SFFDPGEVKN 600 QNIPDASYQT DLISEDFGQD ELLGVFLKQE QQEDNGSVDF SGYQTENICV

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MDPIHTKGTM PTSTSISARK TADMGCDQFP AGLRVLVVDD DPTCLRILEK MLQNCCYAVT  60
KCNRAEIALS MLRENKNGFD IVLSDVHMPD MDGFKLLEQV GLEMDLPVIM MSADDGKNVV  120
MKGVIHGACD YLIKPVRIEA LRNIWQHVVR KRKSEWKDLE QSGSMDDGDR DQNLSEGANY  180
SSSAYDGSWN SSKRKRDAEE ELEERDDTST LKKPRVVWSV ELHQQFVIAV DQLGIDKAVP  240
KKILELMNVP GLSRENVASH LQKYRLYLRR LSGVSPHPSN LNNAFMNPQD HPPFGSMASY  300
NGIDLQTLLV TGQLSPQSLA ALQATGLRRP TAKSSLPMAL VDQTNIFSFE NPKLRFGEDQ  360
TQHLNKTKPA SLFHGIPTKM EPKQLANMQH PSVQTQRNMN MPLNIKSEHG GTQLMHLSQQ  420
QTVGQTLNNS TVSHLPGIPS TLRNPIISGS ITTGNGTADN SHGPRYNLVS PTSVMVNYPM  480
SQTTEVFQEE MNSNLKVSSG VMRYDVFSDL HMQKAHDWDY QNVSTLAFGT PHHGNFIHHS  540
FDISPSSLIH HGFPSSQTNG ENHNSSVNGK TNFPFLDSTQ PGIPQSVAQN SFFDPGEVKN  600
QNIPDASYQT DLISEDFGQD ELLGVFLKQE QQEDNGSVDF SGYQTENICV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-162	ARR-B family protein