PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006234.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 423aa MW: 45815.5 Da PI: 7.0076

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.6	3.6e-37	144	249	3	99
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.........eaesssssasnsssg 88 +k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ ++ sss+++s+++s+ XP_023006234.1 144 PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTVPAIAMsvngtlkipTTTSSSNQDSTDQSA 238 7999***********************************************************88888333323334433222333333322222 PP TCP 89 kaaksaakskk 99 ++++ + ++++ XP_023006234.1 239 SKKRRKRPTNS 249 22222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MASWELLEEE KGVGVGPSSP ALTQHYWAPP FFVGPFPFHP SPNSSFFSQF LLFLSLNPLS 60 QLLPLPSPPP SPLMADIHKQ ELDDDEDDDH HHSPPTHLCI NNSDSSPMNL LPLAPKREHP 120 DNDHETQVLK FTAEIPKTVS SIPPKRPSTK DRHTKVEGRG RRIRIPATCA ARIFQLTREL 180 GHKSDGETIR WLLERAEPAI IAATGTGTVP AIAMSVNGTL KIPTTTSSSN QDSTDQSASK 240 KRRKRPTNSD YVDVNDAVSV SVSVSASASA PNGAVQAATV AGSPAVQQPF PPGFVPVWAI 300 PSNAIIPGAV FMVPSVDCSS TRPQFFSFPT PAAPLINTTA RPISTVPSKL HTSHIQANTT 360 NQSSSTSNSS ASKSESVMAP ISSSTVPTND KTTKQMLREF SLEIYDKEEL QFMSRSSERM 420 KTE

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MASWELLEEE KGVGVGPSSP ALTQHYWAPP FFVGPFPFHP SPNSSFFSQF LLFLSLNPLS  60
QLLPLPSPPP SPLMADIHKQ ELDDDEDDDH HHSPPTHLCI NNSDSSPMNL LPLAPKREHP  120
DNDHETQVLK FTAEIPKTVS SIPPKRPSTK DRHTKVEGRG RRIRIPATCA ARIFQLTREL  180
GHKSDGETIR WLLERAEPAI IAATGTGTVP AIAMSVNGTL KIPTTTSSSN QDSTDQSASK  240
KRRKRPTNSD YVDVNDAVSV SVSVSASASA PNGAVQAATV AGSPAVQQPF PPGFVPVWAI  300
PSNAIIPGAV FMVPSVDCSS TRPQFFSFPT PAAPLINTTA RPISTVPSKL HTSHIQANTT  360
NQSSSTSNSS ASKSESVMAP ISSSTVPTND KTTKQMLREF SLEIYDKEEL QFMSRSSERM  420
KTE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	244	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	6e-59	TCP family protein