PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023006252.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family M-type_MADS
Protein Properties Length: 214aa    MW: 23956.9 Da    PI: 9.4663
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023006252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF73.51.7e-232673249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    + e ks +qvtfskRr+g++KKA ELSvLC+aeva+i+fs+++k++ +
  XP_023006252.1 26 KLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFCF 73
                    67899***************************************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MEEPKLQRKS IPMKKTLGRQ KIEIKKLEKK SSKQVTFSKR RAGLFKKAGE LSVLCGAEVA  60
IIVFSPNDKV FCFGHPNVDV LLDRYLTGNL SPPKPAESYV PVAEFNRDFA DLVLEFEAEK  120
KRAEELIQAS EESRNSGGFW WEEAVEGMRL EELKEFRSSL MDLRAKVAEK VEKLTAVRIG  180
GPLLPALPPP PPPMMPPSFH LAGNHHVATG LGFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-36M-type_MADS family protein