PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023006311.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 278aa    MW: 30455.3 Da    PI: 7.1257
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023006311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.61.8e-18201235135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  XP_023006311.1 201 CLHCGAEKTPQWRAGPYGPKTLCNACGVRYKSGRL 235
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MESSLAFMDD LLDFSSDIGG EDEEDDAVPP FSVKPKAAAV TDSSEFNAGF HPEDSSSCRV  60
LPEEDYAEEE LEWLSNEDVF PAVETFVDIL SDHHHPQPPS LMSVSKQNSP VSVLETTSIS  120
SHGGNKPSAH GSILMSCCDG LKVPGKARSK RRRGRHISGH HLWFKQQPSS RNVKQILPIT  180
IATATTAAAV TTAKTPIGRK CLHCGAEKTP QWRAGPYGPK TLCNACGVRY KSGRLVPEYR  240
PASSPTFSPE LHSNSHRKVM EMRRQKQFGM VVNPMDKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.14e-57GATA family protein