PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006529.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 689aa MW: 78239.2 Da PI: 6.5575

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006529.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.2	2.2e-06	503	536	17	55
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 N++f L+++lP++ +K++iL +++Y+k+L+ XP_023006529.1 503 NEKFMALKSMLPSL-----NEINKVSILNDTIKYLKMLE 536 99*********8.....58*************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MANGTENCDS EPGFLRKQLA VAVKSIQWSY AIFWSPSIRQ HGVLEWCDGY YNGDIKTRKM 60 VQAEDVHVDI MGLHRSEQLR ELYKSLLDGE SEQRAKKPPA SLSPEDLSDA EWYYLVCMSF 120 FFNQGQGLPG RALADDRTIW LCNAQYAESS VFSRSLLAKS ASIQTVVCFP YLGGVIELGV 180 TEQVIFIKNH LFHKLFIYES TSYVSGHHMF RYHVSCFMRC PFKVSEDPSL LQHVKDFLLK 240 FSKPICYKKS SSSAYKDDNG KEPMVAKSDN EIVEVLAMEN VHGLTAAKFS RKAVNGIQRK 300 NDEFGIDSLD RFSNGCERFH QMVDPLRLEG VEGGASCFQS LQFLDDDFSY GFQDSMNPSD 360 CISEALANNP EKVSSKGTND LSLKELQNSN RTKSVSLDPR TDEDLHYKRT IFTILGSSTQ 420 LARSPLLHSF SSRSSFMPWK KGMAEINTAP VQQKMLKNIL FTVPLLSAGC SLNRLKDGER 480 SILKQGNDDF CTKDVVHDKL RENEKFMALK SMLPSLNEIN KVSILNDTIK YLKMLEARVQ 540 ELETCMDSLY YEERFRRKYL DMVEQTSDNY DYDKIEGTLK PSTNKRKACE MDETDLKLKN 600 DIPKDGLKLD VKVTMNEQEV LVNMHCPYRE YILVDVMDTL NDLQLDAHSV QSSDHNGVFS 660 LTLKSKFQGM VAASVGMVKL ALLKIANKS

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MANGTENCDS EPGFLRKQLA VAVKSIQWSY AIFWSPSIRQ HGVLEWCDGY YNGDIKTRKM  60
VQAEDVHVDI MGLHRSEQLR ELYKSLLDGE SEQRAKKPPA SLSPEDLSDA EWYYLVCMSF  120
FFNQGQGLPG RALADDRTIW LCNAQYAESS VFSRSLLAKS ASIQTVVCFP YLGGVIELGV  180
TEQVIFIKNH LFHKLFIYES TSYVSGHHMF RYHVSCFMRC PFKVSEDPSL LQHVKDFLLK  240
FSKPICYKKS SSSAYKDDNG KEPMVAKSDN EIVEVLAMEN VHGLTAAKFS RKAVNGIQRK  300
NDEFGIDSLD RFSNGCERFH QMVDPLRLEG VEGGASCFQS LQFLDDDFSY GFQDSMNPSD  360
CISEALANNP EKVSSKGTND LSLKELQNSN RTKSVSLDPR TDEDLHYKRT IFTILGSSTQ  420
LARSPLLHSF SSRSSFMPWK KGMAEINTAP VQQKMLKNIL FTVPLLSAGC SLNRLKDGER  480
SILKQGNDDF CTKDVVHDKL RENEKFMALK SMLPSLNEIN KVSILNDTIK YLKMLEARVQ  540
ELETCMDSLY YEERFRRKYL DMVEQTSDNY DYDKIEGTLK PSTNKRKACE MDETDLKLKN  600
DIPKDGLKLD VKVTMNEQEV LVNMHCPYRE YILVDVMDTL NDLQLDAHSV QSSDHNGVFS  660
LTLKSKFQGM VAASVGMVKL ALLKIANKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-137	bHLH family protein