PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006530.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 682aa MW: 77521.6 Da PI: 6.7474

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.2	2.2e-06	496	529	17	55
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 N++f L+++lP++ +K++iL +++Y+k+L+ XP_023006530.1 496 NEKFMALKSMLPSL-----NEINKVSILNDTIKYLKMLE 529 99*********8.....58*************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MACEPGFLRK QLAVAVKSIQ WSYAIFWSPS IRQHGVLEWC DGYYNGDIKT RKMVQAEDVH 60 VDIMGLHRSE QLRELYKSLL DGESEQRAKK PPASLSPEDL SDAEWYYLVC MSFFFNQGQG 120 LPGRALADDR TIWLCNAQYA ESSVFSRSLL AKSASIQTVV CFPYLGGVIE LGVTEQVIFI 180 KNHLFHKLFI YESTSYVSGH HMFRYHVSCF MRCPFKVSED PSLLQHVKDF LLKFSKPICY 240 KKSSSSAYKD DNGKEPMVAK SDNEIVEVLA MENVHGLTAA KFSRKAVNGI QRKNDEFGID 300 SLDRFSNGCE RFHQMVDPLR LEGVEGGASC FQSLQFLDDD FSYGFQDSMN PSDCISEALA 360 NNPEKVSSKG TNDLSLKELQ NSNRTKSVSL DPRTDEDLHY KRTIFTILGS STQLARSPLL 420 HSFSSRSSFM PWKKGMAEIN TAPVQQKMLK NILFTVPLLS AGCSLNRLKD GERSILKQGN 480 DDFCTKDVVH DKLRENEKFM ALKSMLPSLN EINKVSILND TIKYLKMLEA RVQELETCMD 540 SLYYEERFRR KYLDMVEQTS DNYDYDKIEG TLKPSTNKRK ACEMDETDLK LKNDIPKDGL 600 KLDVKVTMNE QEVLVNMHCP YREYILVDVM DTLNDLQLDA HSVQSSDHNG VFSLTLKSKF 660 QGMVAASVGM VKLALLKIAN KS

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MACEPGFLRK QLAVAVKSIQ WSYAIFWSPS IRQHGVLEWC DGYYNGDIKT RKMVQAEDVH  60
VDIMGLHRSE QLRELYKSLL DGESEQRAKK PPASLSPEDL SDAEWYYLVC MSFFFNQGQG  120
LPGRALADDR TIWLCNAQYA ESSVFSRSLL AKSASIQTVV CFPYLGGVIE LGVTEQVIFI  180
KNHLFHKLFI YESTSYVSGH HMFRYHVSCF MRCPFKVSED PSLLQHVKDF LLKFSKPICY  240
KKSSSSAYKD DNGKEPMVAK SDNEIVEVLA MENVHGLTAA KFSRKAVNGI QRKNDEFGID  300
SLDRFSNGCE RFHQMVDPLR LEGVEGGASC FQSLQFLDDD FSYGFQDSMN PSDCISEALA  360
NNPEKVSSKG TNDLSLKELQ NSNRTKSVSL DPRTDEDLHY KRTIFTILGS STQLARSPLL  420
HSFSSRSSFM PWKKGMAEIN TAPVQQKMLK NILFTVPLLS AGCSLNRLKD GERSILKQGN  480
DDFCTKDVVH DKLRENEKFM ALKSMLPSLN EINKVSILND TIKYLKMLEA RVQELETCMD  540
SLYYEERFRR KYLDMVEQTS DNYDYDKIEG TLKPSTNKRK ACEMDETDLK LKNDIPKDGL  600
KLDVKVTMNE QEVLVNMHCP YREYILVDVM DTLNDLQLDA HSVQSSDHNG VFSLTLKSKF  660
QGMVAASVGM VKLALLKIAN KS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-136	bHLH family protein