PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006531.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 649aa MW: 73305.4 Da PI: 5.7216

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.3	2.1e-06	463	496	17	55
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 N++f L+++lP++ +K++iL +++Y+k+L+ XP_023006531.1 463 NEKFMALKSMLPSL-----NEINKVSILNDTIKYLKMLE 496 99*********8.....58*************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MANGTENCDS EPGFLRKQLA VAVKSIQWSY AIFWSPSIRQ HGVLEWCDGY YNGDIKTRKM 60 VQAEDVHVDI MGLHRSEQLR ELYKSLLDGE SEQRAKKPPA SLSPEDLSDA EWYYLVCMSF 120 FFNQGQGLPG RALADDRTIW LCNAQYAESS VFSRSLLAKS ASIQTVVCFP YLGGVIELGV 180 TEQVSEDPSL LQHVKDFLLK FSKPICYKKS SSSAYKDDNG KEPMVAKSDN EIVEVLAMEN 240 VHGLTAAKFS RKAVNGIQRK NDEFGIDSLD RFSNGCERFH QMVDPLRLEG VEGGASCFQS 300 LQFLDDDFSY GFQDSMNPSD CISEALANNP EKVSSKGTND LSLKELQNSN RTKSVSLDPR 360 TDEDLHYKRT IFTILGSSTQ LARSPLLHSF SSRSSFMPWK KGMAEINTAP VQQKMLKNIL 420 FTVPLLSAGC SLNRLKDGER SILKQGNDDF CTKDVVHDKL RENEKFMALK SMLPSLNEIN 480 KVSILNDTIK YLKMLEARVQ ELETCMDSLY YEERFRRKYL DMVEQTSDNY DYDKIEGTLK 540 PSTNKRKACE MDETDLKLKN DIPKDGLKLD VKVTMNEQEV LVNMHCPYRE YILVDVMDTL 600 NDLQLDAHSV QSSDHNGVFS LTLKSKFQGM VAASVGMVKL ALLKIANKS

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MANGTENCDS EPGFLRKQLA VAVKSIQWSY AIFWSPSIRQ HGVLEWCDGY YNGDIKTRKM  60
VQAEDVHVDI MGLHRSEQLR ELYKSLLDGE SEQRAKKPPA SLSPEDLSDA EWYYLVCMSF  120
FFNQGQGLPG RALADDRTIW LCNAQYAESS VFSRSLLAKS ASIQTVVCFP YLGGVIELGV  180
TEQVSEDPSL LQHVKDFLLK FSKPICYKKS SSSAYKDDNG KEPMVAKSDN EIVEVLAMEN  240
VHGLTAAKFS RKAVNGIQRK NDEFGIDSLD RFSNGCERFH QMVDPLRLEG VEGGASCFQS  300
LQFLDDDFSY GFQDSMNPSD CISEALANNP EKVSSKGTND LSLKELQNSN RTKSVSLDPR  360
TDEDLHYKRT IFTILGSSTQ LARSPLLHSF SSRSSFMPWK KGMAEINTAP VQQKMLKNIL  420
FTVPLLSAGC SLNRLKDGER SILKQGNDDF CTKDVVHDKL RENEKFMALK SMLPSLNEIN  480
KVSILNDTIK YLKMLEARVQ ELETCMDSLY YEERFRRKYL DMVEQTSDNY DYDKIEGTLK  540
PSTNKRKACE MDETDLKLKN DIPKDGLKLD VKVTMNEQEV LVNMHCPYRE YILVDVMDTL  600
NDLQLDAHSV QSSDHNGVFS LTLKSKFQGM VAASVGMVKL ALLKIANKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-145	bHLH family protein