PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023006573.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 469aa MW: 50449.5 Da PI: 5.8726

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023006573.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51	2.6e-16	284	329	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hne Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq XP_023006573.1 284 HNESERKRRDKINQRIKTLQKLVPNS-----NKTDKASMLDEVIEYLKQLQ 329 ***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MSQCVPNWDI SDPPPSAAAD DVVPMFEYEV AELTWENGQL AMHGLGLPRV TGKIHHGGGG 60 GGGDGSKYTW ENKPARASGT LEYLVNQGTR HGKIGFDVNT DDGSGGGNDL VPWFSDHHKQ 120 TLQTSAASAA TTMDAMVPCD GDKSAAGDAG KATVESSDTP VGLEDEDCRF TERGRVVARA 180 VHAEREWSVC QNQNSVSGSD ATLNTHDRNF TATATATATA TATTSHGSLD NTSSGKRCVN 240 TTTDDHDSVC HSTYQVEEED GGDRKKENPK SSISTKRSRA AVIHNESERK RRDKINQRIK 300 TLQKLVPNSN KTDKASMLDE VIEYLKQLQA QIQMMSRINM PMMLPMAAMQ QQLPMASLMA 360 TPMGLGMGMA GMGMGMALGI DHLNMMATRS SLAAGMSPML HPTAFMPMAA WDGGTYDQRQ 420 PSPSMMIADP ISAFLACQSQ PMTMEAYSRI ATMFQQMNQQ QPTAGGSKN

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MSQCVPNWDI SDPPPSAAAD DVVPMFEYEV AELTWENGQL AMHGLGLPRV TGKIHHGGGG  60
GGGDGSKYTW ENKPARASGT LEYLVNQGTR HGKIGFDVNT DDGSGGGNDL VPWFSDHHKQ  120
TLQTSAASAA TTMDAMVPCD GDKSAAGDAG KATVESSDTP VGLEDEDCRF TERGRVVARA  180
VHAEREWSVC QNQNSVSGSD ATLNTHDRNF TATATATATA TATTSHGSLD NTSSGKRCVN  240
TTTDDHDSVC HSTYQVEEED GGDRKKENPK SSISTKRSRA AVIHNESERK RRDKINQRIK  300
TLQKLVPNSN KTDKASMLDE VIEYLKQLQA QIQMMSRINM PMMLPMAAMQ QQLPMASLMA  360
TPMGLGMGMA GMGMGMALGI DHLNMMATRS SLAAGMSPML HPTAFMPMAA WDGGTYDQRQ  420
PSPSMMIADP ISAFLACQSQ PMTMEAYSRI ATMFQQMNQQ QPTAGGSKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	288	293	ERKRRD
2	289	294	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-83	bHLH family protein