PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007167.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 452aa MW: 49739.8 Da PI: 8.7969

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007167.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.4	5.3e-32	173	230	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgse+prsYY+Ct+++Cpv+k+ve+s +++++ei+Y+++Hnh+k XP_023007167.1 173 DDGYNWRKYGQKLVKGSENPRSYYKCTHPTCPVRKQVEKSL-NGQITEIVYKSKHNHPK 230 8**************************************.*************85 PP
2	WRKY	100.5	1e-31	330	388	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy WrKYGqK+vkg+++prsYY+Ct+agC v+k++er+++d k+v +tYeg+Hnhe XP_023007167.1 330 LDDGYWWRKYGQKVVKGNPNPRSYYKCTYAGCGVRKHIERASHDLKAVMTTYEGKHNHE 388 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MVMEFFFSSR VEEDPNDGRP RLPESTAPPI SSKFSSTPTP NPPLLSAMSQ PLFSPSSFFT 60 IPPGISPTQL LDSPVLLTSS NFQASPTTGA ISTGHHQKNM KQEQHNLAEF SFPRTNPTKS 120 SSSSSIMFQS SSMQQNQPWV SQAAFNFPPE TTMNGGSKSD QHPPSQPKNR ASDDGYNWRK 180 YGQKLVKGSE NPRSYYKCTH PTCPVRKQVE KSLNGQITEI VYKSKHNHPK PEFPRRSSSA 240 SSSSSSSSSS SWLSQALPQT MAAEPKHSMA SDSIPTPENS STTIGDDDSD EQDAKRWKSE 300 SENEIISAAG GKTVREQRVV VQTISSVDKL DDGYWWRKYG QKVVKGNPNP RSYYKCTYAG 360 CGVRKHIERA SHDLKAVMTT YEGKHNHEIP AARGGGSRPV SNNHGNDNGR ASNGGGHVWP 420 SSEISGGDDA FSNMLWRTKE ETADEIFRSL LD

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MVMEFFFSSR VEEDPNDGRP RLPESTAPPI SSKFSSTPTP NPPLLSAMSQ PLFSPSSFFT  60
IPPGISPTQL LDSPVLLTSS NFQASPTTGA ISTGHHQKNM KQEQHNLAEF SFPRTNPTKS  120
SSSSSIMFQS SSMQQNQPWV SQAAFNFPPE TTMNGGSKSD QHPPSQPKNR ASDDGYNWRK  180
YGQKLVKGSE NPRSYYKCTH PTCPVRKQVE KSLNGQITEI VYKSKHNHPK PEFPRRSSSA  240
SSSSSSSSSS SWLSQALPQT MAAEPKHSMA SDSIPTPENS STTIGDDDSD EQDAKRWKSE  300
SENEIISAAG GKTVREQRVV VQTISSVDKL DDGYWWRKYG QKVVKGNPNP RSYYKCTYAG  360
CGVRKHIERA SHDLKAVMTT YEGKHNHEIP AARGGGSRPV SNNHGNDNGR ASNGGGHVWP  420
SSEISGGDDA FSNMLWRTKE ETADEIFRSL LD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-86	WRKY family protein