PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007200.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 363aa MW: 39948.3 Da PI: 8.8274

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_023007200.1 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.4e-23	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_023007200.1 36 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 87 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MFHATKKPSS MTSSHDRPMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA 60 TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDQS IKDGMRASAL ELHRNSGSSS 120 TLMDRSMNEM QLEVQRRLHE QIEVQRHLQL RIEAQGKYMQ SILEKACQTL AGENMAAATA 180 VGAGRFKTTS NNIGTTTNLV SDAANKAFIS PPPHTFHPFQ DINDLFTSEP PAPAPPLIDC 240 LKKPNPFISD TGKTPIFWAD DLRLQDLGTP SATLAPPPPP ISGSADLDPQ QLEMYETKPP 300 PLLLSVGNDV MTNEKKFNVS LKLEGPSPRH SSGHSDEKVN NGMGNNNNPT MSQSQGRNNS 360 HLG

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MFHATKKPSS MTSSHDRPMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA  60
TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDQS IKDGMRASAL ELHRNSGSSS  120
TLMDRSMNEM QLEVQRRLHE QIEVQRHLQL RIEAQGKYMQ SILEKACQTL AGENMAAATA  180
VGAGRFKTTS NNIGTTTNLV SDAANKAFIS PPPHTFHPFQ DINDLFTSEP PAPAPPLIDC  240
LKKPNPFISD TGKTPIFWAD DLRLQDLGTP SATLAPPPPP ISGSADLDPQ QLEMYETKPP  300
PLLLSVGNDV MTNEKKFNVS LKLEGPSPRH SSGHSDEKVN NGMGNNNNPT MSQSQGRNNS  360
HLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-109	G2-like family protein