PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023007388.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 424aa    MW: 50506.4 Da    PI: 8.6361
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023007388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.83.1e-1646137198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ +++   +++ l lp kf+ ++  +   +   tl  ++g  Wev+l  +k++g++ +++GW eFv+  ++k+g fvvF+l+g+++f  +v 
  XP_023007388.1  46 FFKIILHHTLIERK-LDLPSKFVINNRAS-LLHNNATLSLPDGANWEVEL--KKSDGKVSFARGWPEFVQFYNVKAGYFVVFRLEGNRCF--NVL 134
                     77888777777776.********999433.45667999999*********..*************************************9..888 PP

                     EE- CS
              B3  96 vfr 98 
                     +f+
  XP_023007388.1 135 IFD 137
                     887 PP
2B366.15.1e-21323421199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl..iyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                     f  ++ ps+  + + l+lp++fae++  +  es++++le  +gr W+v +  ++  +++r+ l+ GWk+F+ +n+LkegD++vF+l++r  +  +
  XP_023007388.1 323 FMVTMRPSYIQTGNYLSLPRSFAERYL-Q--ESTDVKLEVADGRIWSVWCgvRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRiPKVFF 414
                     778999********************4.4..5679*************98667778888899*************************99988889 PP

                     EEEEE-S CS
              B3  93 vvkvfrk 99 
                     +v++fr+
  XP_023007388.1 415 KVTIFRR 421
                     9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MINFGRVLHD FIDYCCVFTI NNKQKPIRKH KQSLRMAFFT SPIPHFFKII LHHTLIERKL  60
DLPSKFVINN RASLLHNNAT LSLPDGANWE VELKKSDGKV SFARGWPEFV QFYNVKAGYF  120
VVFRLEGNRC FNVLIFDLSA TEIDYPIKPR IFRRLRKDHN RAFDRRPPIL LPKSENEDDE  180
DNSVVVLNDA VSRKRKREKD HEAAFCSLRE MKKMMRTNMK IKHQRFTTPQ RFSDDEEEDE  240
DEEEEEEDEE DEEDEEDEEE EDYSWRQRKY RGSARNHEDG GRFSPESMRP MHPPRTPKPL  300
TENQERVLRI ASSFKLRTKN PSFMVTMRPS YIQTGNYLSL PRSFAERYLQ ESTDVKLEVA  360
DGRIWSVWCG VRWAFTRRRT ELKCGWKRFA VDNQLKEGDV CVFELMNRIP KVFFKVTIFR  420
RPAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1193199RKRKREK
2193222RKRKREKDHEAAFCSLREMKKMMRTNMKIK
3194223RKRKREKDHEAAFCSLREMKKMMRTNMKIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-22B3 family protein