PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007428.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 346aa MW: 37866 Da PI: 7.9481

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	6.9e-25	98	142	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_023007428.1 98 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 142 79****************************************986 PP
2	QLQ	60.5	4.8e-21	36	72	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT Q+q+L++Q+l++Ky++a++PvPp+L+++iqk XP_023007428.1 36 SPFTVLQWQELEHQALIFKYMMAGLPVPPDLVLPIQK 72 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MNSSGCGGED GSRTVVVGGT AAAAAGSGMM GMNNRSPFTV LQWQELEHQA LIFKYMMAGL 60 PVPPDLVLPI QKSFESISHR FFHHPTMAYC SFYGKKVDPE PGRCRRTDGK KWRCSKDAYP 120 DSKYCERHMH RGRNRSRKPV ESQTMTQSSS TVTSHTAIGS SSSSSGAGSF HGLPLNVLSN 180 SQGTPTGTSQ PHYPLDSIPY GIPSKDYRYI QGLRPEAGVH SFFSEASGSS RAVQMDAPMD 240 NNTWPMMPPR SPSFPASKST ENSIFQSGYP PYSFFGGEFA SGDTLKQEGQ SLQPFFDEWP 300 KTRESWTGLD DERSNQTSYS TTQLSISIPM ASSDLSTTSS KSPHDN

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MNSSGCGGED GSRTVVVGGT AAAAAGSGMM GMNNRSPFTV LQWQELEHQA LIFKYMMAGL  60
PVPPDLVLPI QKSFESISHR FFHHPTMAYC SFYGKKVDPE PGRCRRTDGK KWRCSKDAYP  120
DSKYCERHMH RGRNRSRKPV ESQTMTQSSS TVTSHTAIGS SSSSSGAGSF HGLPLNVLSN  180
SQGTPTGTSQ PHYPLDSIPY GIPSKDYRYI QGLRPEAGVH SFFSEASGSS RAVQMDAPMD  240
NNTWPMMPPR SPSFPASKST ENSIFQSGYP PYSFFGGEFA SGDTLKQEGQ SLQPFFDEWP  300
KTRESWTGLD DERSNQTSYS TTQLSISIPM ASSDLSTTSS KSPHDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-44	GRF family protein