PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023007614.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 223aa    MW: 23376.6 Da    PI: 5.9553
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023007614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.92e-06120141223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC  C+k+F+++  L  H+r+H
  XP_023007614.1 120 KCATCNKVFKSWKALFGHLRSH 141
                     7********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MEKNTNANAD INTVPESTSP DQRHGGERSP MAVSPPPASI DDNNPTPPVI NLSSVAPAPE  60
RGTTGDVGVS SSSSHGHVGG GSNTEVGKKR GRGDGGEQQQ QVKAAKKKGE LTEVPKGDPK  120
CATCNKVFKS WKALFGHLRS HPERTYRGAL PPPTAAELDI RHCQQQFAST LLTVAQGVAA  180
SRRGLDIDLN QPSAAEESGS PEKSGGVGFD LNVEQPPESE NDE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18793GKKRGRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35700.17e-16C2H2 family protein