PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007744.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 643aa MW: 70729 Da PI: 5.8214

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.4	1.1e-12	461	506	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L Av YI++L XP_023007744.1 461 NHVEAERQRREKLNQKFYALRAVVPNV-----SKMDKASLLGDAVSYINEL 506 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
MTDYRLSTMN LWTDENASLM EAFMNSDLSS YWAPSAASSH SLHNQPPPQS SASTSNPPPD 60 PPKSVAVFNQ ETLQQRLQAL IDGARESWTY AIFWQSSYDY PDGSVLGWGD GYYKGEEDKG 120 KGKAKVVTSA AEQAHRKKVL RDLNSLISGS AAGPDDAVDE EVTDTEWFFL VSMTQSFVNG 180 VGLPSQAFFD STPIWISGAD RLSASACERA RQGKVFGLQT MVCIPSPNGV VEMGSTELIH 240 RTSDLMNKVK ILFNFNNLET SSWISETTAA ASTADEGEND PSSMWISEPS STIATTVPSG 300 DVPRKLTQSE NQQQSHQKQS QSFLNFSDYG FESNPSKSIT TDTTTTTTTT NTPSFKPESG 360 GMLNFGSGNL FSSHAQYITD EQNEKKRSPP SRSSNDEGIL SFTSGVILPS SGKVKSGDSD 420 HSDLEASVIR EVDSCTKSIE PEKRPRKRGR KPANGREEPL NHVEAERQRR EKLNQKFYAL 480 RAVVPNVSKM DKASLLGDAV SYINELKSKL QIIETEKTEM GKHLEFMKKE MGGKDLGHYT 540 NTIDQDLKTG NRKVMEIEIE VKIMGWDAMI RIQSSKKNHP AARLMTALKD LDLEMLHASV 600 SVVNDLMIQQ ATVKMGSRCY TQEQLKMALI ARVGGGGGNH GSM

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

MTDYRLSTMN LWTDENASLM EAFMNSDLSS YWAPSAASSH SLHNQPPPQS SASTSNPPPD  60
PPKSVAVFNQ ETLQQRLQAL IDGARESWTY AIFWQSSYDY PDGSVLGWGD GYYKGEEDKG  120
KGKAKVVTSA AEQAHRKKVL RDLNSLISGS AAGPDDAVDE EVTDTEWFFL VSMTQSFVNG  180
VGLPSQAFFD STPIWISGAD RLSASACERA RQGKVFGLQT MVCIPSPNGV VEMGSTELIH  240
RTSDLMNKVK ILFNFNNLET SSWISETTAA ASTADEGEND PSSMWISEPS STIATTVPSG  300
DVPRKLTQSE NQQQSHQKQS QSFLNFSDYG FESNPSKSIT TDTTTTTTTT NTPSFKPESG  360
GMLNFGSGNL FSSHAQYITD EQNEKKRSPP SRSSNDEGIL SFTSGVILPS SGKVKSGDSD  420
HSDLEASVIR EVDSCTKSIE PEKRPRKRGR KPANGREEPL NHVEAERQRR EKLNQKFYAL  480
RAVVPNVSKM DKASLLGDAV SYINELKSKL QIIETEKTEM GKHLEFMKKE MGGKDLGHYT  540
NTIDQDLKTG NRKVMEIEIE VKIMGWDAMI RIQSSKKNHP AARLMTALKD LDLEMLHASV  600
SVVNDLMIQQ ATVKMGSRCY TQEQLKMALI ARVGGGGGNH GSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	443	451	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-174	bHLH family protein