PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007764.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 560aa MW: 62144.1 Da PI: 5.1882

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.6	5.6e-28	314	368	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_023007764.1 314 KMKVDWTPELHRKFVQAVEQL-GVNQAIPSRILELMKVEGLTRHNVASHLQKYRMH 368 5689***************.9*****************************96 PP
2	Myb_DNA-binding	43.6	6.8e-14	317	366	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_023007764.1 317 VDWTPELHRKFVQAVEQLGVNqaIPSRILELMKvEGLTRHNVASHLQKYR 366 57***********************************************7 PP
3	Response_reg	23.6	2.6e-09	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+ d + + +r+ le+ +y +v + + +al + k +++ ++ + + dG +k +++++ +lp i+++ +++ +++ +G XP_023007764.1 20 VLLLDGDSSSSAEIRTKLEEMEY-VVVTYCNENDALSAISSKPdtFHVAIVEVTTSSHDGN--FKFLEAAK-DLPTIMISNIHCLSTMMKCIALG 110 68888889999999*******.***********776667**********95..56666655.9***9999******* PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp ++++l++ XP_023007764.1 111 AIEFLQKPLSEDKLRN 126 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MVCTASDLQG WKDFPKGLRV LLLDGDSSSS AEIRTKLEEM EYVVVTYCNE NDALSAISSK 60 PDTFHVAIVE VTTSSHDGNF KFLEAAKDLP TIMISNIHCL STMMKCIALG AIEFLQKPLS 120 EDKLRNIWQH VVHKAFNAGG SAVPSSLKPI KESVASILHL ESENSENDNP VPKELEISSS 180 DDDNDRELLE GSDKYPAPST PQQKHGMRLV DDGDCQDQLN CLLEKECAEQ DGESKSVETT 240 CINSLGEGIS QVENTQLPDK EGIKEEENSA DGCGAASNDD HEIHDQDIIS SSEENKSKAC 300 GLGNSSGTKV SRKKMKVDWT PELHRKFVQA VEQLGVNQAI PSRILELMKV EGLTRHNVAS 360 HLQKYRMHKR HILPKQDDSS WSHSKDPMRK NCYPQRPVMA FPPPYHSNHV MPVAPIYPPW 420 GHMACPSPSV QMWVSPGYPS WQPQEIWPWK SYPGMYADAW GCPVTPPPHS PLPSHPPQQP 480 IFRFENADAH DKSYGIAFNP MELQLADEEI DKVVIEAISK PWLPLPLGLK PPSTESVLSE 540 LSRQGISTVP SQINGSKLLQ

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MVCTASDLQG WKDFPKGLRV LLLDGDSSSS AEIRTKLEEM EYVVVTYCNE NDALSAISSK  60
PDTFHVAIVE VTTSSHDGNF KFLEAAKDLP TIMISNIHCL STMMKCIALG AIEFLQKPLS  120
EDKLRNIWQH VVHKAFNAGG SAVPSSLKPI KESVASILHL ESENSENDNP VPKELEISSS  180
DDDNDRELLE GSDKYPAPST PQQKHGMRLV DDGDCQDQLN CLLEKECAEQ DGESKSVETT  240
CINSLGEGIS QVENTQLPDK EGIKEEENSA DGCGAASNDD HEIHDQDIIS SSEENKSKAC  300
GLGNSSGTKV SRKKMKVDWT PELHRKFVQA VEQLGVNQAI PSRILELMKV EGLTRHNVAS  360
HLQKYRMHKR HILPKQDDSS WSHSKDPMRK NCYPQRPVMA FPPPYHSNHV MPVAPIYPPW  420
GHMACPSPSV QMWVSPGYPS WQPQEIWPWK SYPGMYADAW GCPVTPPPHS PLPSHPPQQP  480
IFRFENADAH DKSYGIAFNP MELQLADEEI DKVVIEAISK PWLPLPLGLK PPSTESVLSE  540
LSRQGISTVP SQINGSKLLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-143	ARR-B family protein