PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007768.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 552aa MW: 60600.4 Da PI: 7.0753

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007768.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.2	6e-32	206	263	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+++++i+Y+g+H+h+k XP_023007768.1 206 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITDIVYKGTHDHPK 263 8**************************************.*************85 PP
2	WRKY	105.3	3.2e-33	378	436	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_023007768.1 378 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 436 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MDPTEAASTA AAGAKYKLMS PAKLPIFRSP CITIPPGLSP SSFLDSPVLL TNFKVEPSPT 60 TGSFTKLPMA RDSSSLAIYP MTTMACSNAN ASDEGNSNYF EFKPYVGPNM VPADMSHRKD 120 EQSCELQVQG QPQPFTAPPM TKSEINVISN DSSRSTQMDP VASGAAVPDV DGDDFNHSLN 180 TNTRAQAAQS DPKGSGSPVV SDRISDDGYN WRKYGQKQVK GSEFPRSYYK CTHPNCEVKK 240 LFERSHDGQI TDIVYKGTHD HPKLQPSRRY SAGASVKDGP DKPSPLTGQD DRSCSIYTQT 300 VHSIEPNGTP ERLAANDSNT EGAGTTLPCK NPDELDDDDI IMKRRKMELG GFEACPAMVR 360 PIREPRVVVQ TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTNVGCP VRKHVERASH 420 DPKAVITTYE GKHNHDVPTA KTSSHDAAGP LRTAPLRYRL EDRDTVSLDL GVGIGENRSN 480 EYRQQALAPN GNFNFEVVQE NSAPTYFSVH NRGMNQHGPR ESLSESRSME VVPLNHSSHP 540 YPPSIGRILT GP

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MDPTEAASTA AAGAKYKLMS PAKLPIFRSP CITIPPGLSP SSFLDSPVLL TNFKVEPSPT  60
TGSFTKLPMA RDSSSLAIYP MTTMACSNAN ASDEGNSNYF EFKPYVGPNM VPADMSHRKD  120
EQSCELQVQG QPQPFTAPPM TKSEINVISN DSSRSTQMDP VASGAAVPDV DGDDFNHSLN  180
TNTRAQAAQS DPKGSGSPVV SDRISDDGYN WRKYGQKQVK GSEFPRSYYK CTHPNCEVKK  240
LFERSHDGQI TDIVYKGTHD HPKLQPSRRY SAGASVKDGP DKPSPLTGQD DRSCSIYTQT  300
VHSIEPNGTP ERLAANDSNT EGAGTTLPCK NPDELDDDDI IMKRRKMELG GFEACPAMVR  360
PIREPRVVVQ TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTNVGCP VRKHVERASH  420
DPKAVITTYE GKHNHDVPTA KTSSHDAAGP LRTAPLRYRL EDRDTVSLDL GVGIGENRSN  480
EYRQQALAPN GNFNFEVVQE NSAPTYFSVH NRGMNQHGPR ESLSESRSME VVPLNHSSHP  540
YPPSIGRILT GP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-171	WRKY family protein