PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023007770.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 463aa MW: 51542.3 Da PI: 7.4429

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023007770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.6	4.7e-32	117	174	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers+ d+++++i+Y+g+H+h+k XP_023007770.1 117 DDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITDIVYKGTHDHPK 174 8**************************************.*************85 PP
2	WRKY	105.6	2.5e-33	289	347	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct gCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_023007770.1 289 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHD 347 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MKVDITFVMS DIKLKSYHVS FLMSYMSHRK DEQSCELQVQ GQPQPFTAPP MTKSEINVIS 60 NDSSRSTQMD PVASGAAVPD VDGDDFNHSL NTNTRAQAAQ SDPKGSGSPV VSDRISDDGY 120 NWRKYGQKQV KGSEFPRSYY KCTHPNCEVK KLFERSHDGQ ITDIVYKGTH DHPKLQPSRR 180 YSAGASVKDG PDKPSPLTGQ DDRSCSIYTQ TVHSIEPNGT PERLAANDSN TEGAGTTLPC 240 KNPDELDDDD IIMKRRKMEL GGFEACPAMV RPIREPRVVV QTLSEVDILD DGYRWRKYGQ 300 KVVRGNPNPR SYYKCTNVGC PVRKHVERAS HDPKAVITTY EGKHNHDVPT AKTSSHDAAG 360 PLRTAPLRYR LEDRDTVSLD LGVGIGENRS NEYRQQALAP NGNFNFEVVQ ENSAPTYFSV 420 HNRGMNQHGP RESLSESRSM EVVPLNHSSH PYPPSIGRIL TGP

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MKVDITFVMS DIKLKSYHVS FLMSYMSHRK DEQSCELQVQ GQPQPFTAPP MTKSEINVIS  60
NDSSRSTQMD PVASGAAVPD VDGDDFNHSL NTNTRAQAAQ SDPKGSGSPV VSDRISDDGY  120
NWRKYGQKQV KGSEFPRSYY KCTHPNCEVK KLFERSHDGQ ITDIVYKGTH DHPKLQPSRR  180
YSAGASVKDG PDKPSPLTGQ DDRSCSIYTQ TVHSIEPNGT PERLAANDSN TEGAGTTLPC  240
KNPDELDDDD IIMKRRKMEL GGFEACPAMV RPIREPRVVV QTLSEVDILD DGYRWRKYGQ  300
KVVRGNPNPR SYYKCTNVGC PVRKHVERAS HDPKAVITTY EGKHNHDVPT AKTSSHDAAG  360
PLRTAPLRYR LEDRDTVSLD LGVGIGENRS NEYRQQALAP NGNFNFEVVQ ENSAPTYFSV  420
HNRGMNQHGP RESLSESRSM EVVPLNHSSH PYPPSIGRIL TGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	1e-141	WRKY family protein