PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511416.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 314aa    MW: 36266.9 Da    PI: 6.9851
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.68.8e-5261331128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppGfrFhP+deelv +yLk+kveg ++el evi+ +d+yk++Pw+Lp k  + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkdk++ 
  XP_023511416.1   6 LPPGFRFHPRDEELVGYYLKRKVEGLPIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKIN 99 
                     79****************************.99**************95344555788************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + + +++g +ktLvf++grap+g + dWvmheyrl
  XP_023511416.1 100 C-QFSVMGYRKTLVFHRGRAPSGDRMDWVMHEYRL 133
                     *.8889***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGSGSLPPGF RFHPRDEELV GYYLKRKVEG LPIELEVIPV IDLYKFDPWE LPEKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDKKINC QFSVMGYRKT LVFHRGRAPS  120
GDRMDWVMHE YRLCDEFSHG TPNFKGAFAL CRIVKKNDNP REPKGNVVGN GRDSEDSTST  180
KLVVSNEFSN ISKDDSSQTN FLTDESRLSS PMTSSYDTNM MSWCNMSIME TNREKVWISP  240
DLILDSSKQD YTEMQGAMSI CFPRLYYSGS TIPWSPYEYS NYTGNDIEFE DNLNQIGGCI  300
PPYSTHLNRY PNCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.11e-99NAC family protein