PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511439.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 85aa    MW: 9758.95 Da    PI: 8.9687
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.41.6e-081058248
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48
                     ++WT+   + + +a + +  +   +W  +a+ +g  +t++++k ++q +l
   XP_023511439.1 10 NAWTPMQNKAFEKALAVYDQDtpeRWLNVAKAVG-EKTEEEVKRHYQLLL 58
                     68*****************99*************.9***********875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MASMSSRGSN AWTPMQNKAF EKALAVYDQD TPERWLNVAK AVGEKTEEEV KRHYQLLLHD  60
VKHIESGNVP FPYRNSSDDL PRKRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.17e-31MYB_related family protein