PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023511442.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 215aa MW: 24521.2 Da PI: 4.9095

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023511442.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	109.6	3.5e-34	12	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv++L++k++ +++ +vi+++d++ ++Pw+L+ k+ +e ++wyf+s++ r+t++gyW+ g+d +vls+ XP_023511442.1 12 LPPGFRFHPTDEELVVHFLHRKAALLPCHP-DVIPDLDLFPYDPWELEGKALGEGNRWYFYSRKID--------ARVTDNGYWNPLGRDDPVLST 97 79***********************999.99**********977778899**9866........599************99 PP NAM 96 .kgelvglkktLvfy......kgrapkgektdWvmheyrl 128 ++++vg+kk + f+ a ++ kt+W+mheyrl XP_023511442.1 98 aTSQVVGMKKYFLFHaaatatASAAADPIKTNWIMHEYRL 137 78889******77766546777788*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MAAADHSHNF NLPPGFRFHP TDEELVVHFL HRKAALLPCH PDVIPDLDLF PYDPWELEGK 60 ALGEGNRWYF YSRKIDARVT DNGYWNPLGR DDPVLSTATS QVVGMKKYFL FHAAATATAS 120 AAADPIKTNW IMHEYRLPDA ASSSSSSSSS STRSSRRRGR PKRQDYSKWV LCRVYERDEE 180 KEEEEEEDGA ELSCLDEVFL SLEDLDEISL PTRIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	5e-73	NAC family protein