PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511443.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 214aa    MW: 24393.1 Da    PI: 4.9095
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM109.73.4e-34121371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv++L++k++  +++  +vi+++d++ ++Pw+L+ k+ +e ++wyf+s++           r+t++gyW+  g+d +vls+
  XP_023511443.1  12 LPPGFRFHPTDEELVVHFLHRKAALLPCHP-DVIPDLDLFPYDPWELEGKALGEGNRWYFYSRKID--------ARVTDNGYWNPLGRDDPVLST 97 
                     79*************************999.99**************977778899******9866........599****************99 PP

             NAM  96 .kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                      ++++vg+kk + f+         a ++ kt+W+mheyrl
  XP_023511443.1  98 aTSQVVGMKKYFLFHaaatatASAAADPIKTNWIMHEYRL 137
                     78889**********77766546777788*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MAAADHSHNF NLPPGFRFHP TDEELVVHFL HRKAALLPCH PDVIPDLDLF PYDPWELEGK  60
ALGEGNRWYF YSRKIDARVT DNGYWNPLGR DDPVLSTATS QVVGMKKYFL FHAAATATAS  120
AAADPIKTNW IMHEYRLPDA ASSSSSSSSS STRSSRRRGR PKRDYSKWVL CRVYERDEEK  180
EEEEEEDGAE LSCLDEVFLS LEDLDEISLP TRIQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157164RRGRPKRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.15e-73NAC family protein