PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511472.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 314aa    MW: 36009.6 Da    PI: 8.4504
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1744.3e-54111411129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPtdeel+ +yL+kkv+ + +el +vi+evd++k+ePwdL+ k ++ + +++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk +
  XP_023511472.1  11 VPPGFRFHPTDEELLYYYLRKKVSYEAIEL-DVIREVDLNKLEPWDLKdKcRIGSgHQNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKGI 104
                     69****************************.9***************843444443666************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                     + ++++ +g++ktLvfy+grap+g+ktdW+mheyrle
  XP_023511472.1 105 HMANSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLE 141
                     ***********************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MMPENGQHFS VPPGFRFHPT DEELLYYYLR KKVSYEAIEL DVIREVDLNK LEPWDLKDKC  60
RIGSGHQNEW YFFSHKDKKY PTGTRTNRAT SAGFWKATGR DKGIHMANSK RIGMRKTLVF  120
YTGRAPHGQK TDWIMHEYRL EDQDPEIQTQ EDGWVVCRVF KKKSQKAEGL EYHAHTKVGG  180
SSSGSAALMG AEIGEPKRHN HTQQPYNEYG LDGCMQLPQL FSPDSAVATP VSIECPQNMW  240
RLNCGGVQQE RLNTDWSFLS RLLASDHQSR TKSALPDQLS VGHPNSTMFP FPFPFPFPYP  300
YHLPSAADSF KFSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.11e-102NAC family protein