PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511529.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 204aa    MW: 23882 Da    PI: 7.253
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.64.5e-14171418125
             NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiyk.vePwdLpkkvka.eekewyfFskrdkkyatgk....rknratk..sgyWkatgkdkevls 94 
                     +Ptd++l+ +yL+ k+++ +  + +++ ++++y  +ePw++  ++ + + +++yfF+k +++++++     + nr++   +g+W+     k++++
  XP_023511529.1  17 QPTDQQLL-QYLHWKIHDLPYFT-DIVFDCNLYGgIEPWKIWLRFGGiDGERLYFFIKLKRSTNNSGrlsaHINRKVGlaNGTWSGENLVKSIFA 109
                     6*******.9**********777.889999998537*****854444277789******9999986623223455433559************99 PP

             NAM  95 k..kgelvglkktLvfykgrapkgektdWvmhe 125
                     +  +++ +g +k + + + + ++ ++ +W+mhe
  XP_023511529.1 110 TktDKQIIGYRKCFRYENVQLSE-HHGEWIMHE 141
                     8777888********98655555.89******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MGGRESSSVD IEEVVDQPTD QQLLQYLHWK IHDLPYFTDI VFDCNLYGGI EPWKIWLRFG  60
GIDGERLYFF IKLKRSTNNS GRLSAHINRK VGLANGTWSG ENLVKSIFAT KTDKQIIGYR  120
KCFRYENVQL SEHHGEWIMH EDSIHQVEDS NYVLCRLSKN ERLKRKLGKN LELQRHSKKR  180
ITRPESTIEQ DTMSDVTMDE DMSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33280.11e-07NAC family protein