PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023511533.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 208aa MW: 24381.8 Da PI: 8.0069

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023511533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.4	1.2e-18	9	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka.eekewyfFskrdkkyatgk....rknratk..sgyWkatg 87 lp+G++F+Ptd++l+ +yL+ k+++ + ++ ++d+y ++ePw++ ++ + + + +yfF+k ++ +++++ + nr++ +g+W+ XP_023511533.1 9 LPVGVKFKPTDQQLL-QYLNFKIHALPYFK-GAVLDCDLYgEIEPWEIWLRFGGiNGQYLYFFTKLKRLTNNSEhlwaHINRKIGlaNGTWSGEN 101 799**********.9*****9655.689999999468*854444266788*99988876656666677544449*** PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++ +++ +g k + + + + p+ ++ +W+mhey+l XP_023511533.1 102 SASPIFATktDKQIIGYCKCFRYENVQLPE-HHGEWFMHEYSL 143 *998777888*****9999998.89******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MDSRNRSLLP VGVKFKPTDQ QLLQYLNFKI HALPYFKGAV LDCDLYGEIE PWEIWLRFGG 60 INGQYLYFFT KLKRLTNNSE HLWAHINRKI GLANGTWSGE NSASPIFATK TDKQIIGYCK 120 CFRYENVQLP EHHGEWFMHE YSLHQDSIHQ VVDSDYVLCR LSKNERVKRK LLKNLELQQH 180 SKKRIMAPGS TIEQDTMSDV TIDQDFDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	2e-12	NAC family protein