PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023511534.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 187aa MW: 22061.1 Da PI: 9.5193

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023511534.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	65.6	1.5e-20	9	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka.eekewyfFskrdkkyatgk....rknratk..sgyWkatg 87 lp+G+rF+Ptd +l+ +yL+ k++g++ +++ ++d+y ++ePw++ ++ + + +++yfF+k +++++++ + nr++ +g+W+ XP_023511534.1 9 LPVGVRFRPTDPQLL-QYLHWKIHGQPYFK-RAVLDCDLYgEMEPWEIWLRFGGiDGEDLYFFTKLKRSTNNSGrlsaHINRKVGlaNGTWSGEN 101 79***********.9******655.789999998468*854443377899**9999986623223455433559*** PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++ +++ +g k + + + + p+ ++ +W+mhey+l XP_023511534.1 102 SASPIFATktDKTIIGYCKRFRYENVQLPE-HHGEWIMHEYSL 143 **98666677*****9999998.89******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MGSHDRSLLP VGVRFRPTDP QLLQYLHWKI HGQPYFKRAV LDCDLYGEME PWEIWLRFGG 60 IDGEDLYFFT KLKRSTNNSG RLSAHINRKV GLANGTWSGE NSASPIFATK TDKTIIGYCK 120 RFRYENVQLP EHHGEWIMHE YSLHQDSIQQ AVDSDYVLCR FKKNERLKRK LQKDLEEQQL 180 SKRRMTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	5e-15	NAC family protein