PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511537.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 187aa    MW: 22156.3 Da    PI: 10.0415
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511537.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.25.9e-18101432128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka.eekewyfFskrdkkyatgk....rknratk..sgyWkatgk 88 
                      +G+rF+Ptd++l+ +yL  k++g++    +++ + d+y ++e w++  ++ + + + +yfF+k +++++++     + nr++   +g+W+   +
  XP_023511537.1  10 LVGVRFRPTDQQLL-QYLYWKIHGQPYFK-RAVLDSDLYgEIELWEIWLRFGGiDGEYLYFFTKLKRSTNNSGrlsaHINRKVGlaNGTWSGENS 102
                     68************.9**********666.567777777378*****855544266677*****99999986623323455433559******** PP

             NAM  89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++++  +++ +g  k + + +++ pk ++ +W+mhey+l
  XP_023511537.1 103 ASPIFATktDKTIIGYCKRFRYENAQLPK-HHGEWIMHEYSL 143
                     *****98666677*********9888888.89********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MDSHDRPLLL VGVRFRPTDQ QLLQYLYWKI HGQPYFKRAV LDSDLYGEIE LWEIWLRFGG  60
IDGEYLYFFT KLKRSTNNSG RLSAHINRKV GLANGTWSGE NSASPIFATK TDKTIIGYCK  120
RFRYENAQLP KHHGEWIMHE YSLHQDSIQQ AADSDYVLCR FKKNERLKRK LQKNLEEKQL  180
SKRRITT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.22e-13NAC family protein