PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023511720.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 213aa    MW: 23591.5 Da    PI: 6.3928
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023511720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.62.4e-212473255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrd ++    ++r++lg+f+tae+Aa+a+++a+++l+g
  XP_023511720.1 24 RFRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTAEDAARAYDEAALSLRG 73
                    69*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MRRGRDMDPL MAAETVQEPD KEVRFRGVRK RPWGRYAAEI RDPWKKTRVW LGTFDTAEDA  60
ARAYDEAALS LRGPKAKTNF PLHPSTISVH QKIPFSQEFH DSAGLCKISD IPVNRPTSSS  120
LSSTVESFSG PRVSIPAPSV PKICRQSLPL VSPDDCHSDC DSSSSVVDDS EEYAHTSSIR  180
RVLPFDLNLP PPLPPLHDVD LSGDDLHATA LCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-26ERF family protein