PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023511765.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

YABBY

Protein Properties

Length: 206aa MW: 23358 Da PI: 8.5823

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023511765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	172.8	2.3e-53	3	160	2	165
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasql.laaeshldeslkeelleelkveeenlksnvekeesasts 95 ++f+ +e++CyvqC+ C+til+vsvP +sl++ vtv CGhC+sllsvn++ a+ + l s l++ +l +e e ++ k ++ +s+ + XP_023511765.1 3 HLFELPEKICYVQCGICTTILLVSVPCSSLSMEVTVTCGHCSSLLSVNMMRATLVpLHFLSSLSR----NLPKEGCREMSSGKLFDSFIRSNL-K 92 78999****************************************998766331233333333....333332222222222222222222.2 PP YABBY 96 vsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPk 165 s ++ e+ +p +pp v++PPekrqrvPsayn+fik+ei+r+ka+nP+++h+eaf +aaknWa fP+ XP_023511765.1 93 FSEYE---VEEGLIPVTPPsVNKPPEKRQRVPSAYNCFIKDEIRRLKAENPQMTHKEAFRTAAKNWANFPP 160 22222...233345555555***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MNHLFELPEK ICYVQCGICT TILLVSVPCS SLSMEVTVTC GHCSSLLSVN MMRATLVPLH 60 FLSSLSRNLP KEGCREMSSG KLFDSFIRSN LKFSEYEVEE GLIPVTPPSV NKPPEKRQRV 120 PSAYNCFIKD EIRRLKAENP QMTHKEAFRT AAKNWANFPP TIQQKEDPQN TQIPEVKTQS 180 LRSEVMIFNQ LFKPITPNGK QNTNHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	2e-55	YABBY family protein