PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023511995.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 272aa MW: 31664.3 Da PI: 7.4582

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023511995.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	9.7e-17	20	67	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +l++ v ++G ++W+ Ia+ g++Rt+k+c++rw +yl XP_023511995.1 20 KGPWTEQEDIQLICFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYL 67 79********************************************97 PP
2	Myb_DNA-binding	54.6	2.4e-17	73	118	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E+ l +++++++G++ W++Iar+++ gRt++++k++w++++ XP_023511995.1 73 RGKMTAQEERLVLELHNKWGNR-WSKIARKLP-GRTDNEIKNYWRTHM 118 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MSWWERRKEQ RMVEGQEIRK GPWTEQEDIQ LICFVGLFGD RRWDFIAKVS GLNRTGKSCR 60 LRWVNYLHPG LKRGKMTAQE ERLVLELHNK WGNRWSKIAR KLPGRTDNEI KNYWRTHMRK 120 KAQEKRRALS SSSSSSSSYS SNNPAVEFPA DTGPVKFFDS GGSEISASSS STKKKMVENQ 180 ELGDPNGFSM DDIWKDIDLS DHESLTMNQD VYSEEDCNNF SCPALTSPTP WDYYCGDSLW 240 RMEEEEESKL IFSGYDHNGR PRLAQPNQNF FY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46130.1	9e-79	MYB family protein