PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512022.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 151aa MW: 18077.9 Da PI: 10.798

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.6	6e-20	10	69	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Lee +++ ++p+a+++++++++l +++ ++V++WFqN++a++++ XP_023512022.1 10 SRWCPTPEQVMILEEIYRNgLKTPNATQIQHITSHLslygKIEGKNVFYWFQNHKARDRQ 69 7***************99***********************************996 PP
2	Wus_type_Homeobox	117.6	5.8e-38	9	70	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +RW+PtpeQ++iLee+y++Gl+tPn+ +iq+it++L+ yGkie+kNVfyWFQN+kaR+rqk XP_023512022.1 9 PSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQK 70 58***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MSPAAAATPS RWCPTPEQVM ILEEIYRNGL KTPNATQIQH ITSHLSLYGK IEGKNVFYWF 60 QNHKARDRQK LRRKLYKQLQ QHHFFIKRQR FDDHHLFHCF LHHHHHQQRF LPPLLPLPTH 120 FQVRKFIGIT TFQNGIILSV TNPMWDLGWG I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	1e-39	WOX family protein