PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512161.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 350aa MW: 39236.2 Da PI: 6.358

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.8	9e-49	25	151	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+P+deel+ +yLkkk++g++ ++ +vi+e++i+k+ePwdLp k + +++ew+fFs+r +ky++g++++rat+ gyWkatgk+++v+s XP_023512161.1 25 MFPGFRFSPKDEELILFYLKKKLQGSDDSV-DVISEIEICKFEPWDLPGKSRIpSDNEWFFFSPRGRKYPNGTQNKRATELGYWKATGKERNVKS 118 579**********************999.99***********543333789********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e +g+k+tLvf+ grap+ge+t+W+mhey l XP_023512161.1 119 -GSEIIGTKRTLVFHLGRAPTGERTEWIMHEYCL 151 .9****************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MESKGKGTMG GVSREAEMSM AALSMFPGFR FSPKDEELIL FYLKKKLQGS DDSVDVISEI 60 EICKFEPWDL PGKSRIPSDN EWFFFSPRGR KYPNGTQNKR ATELGYWKAT GKERNVKSGS 120 EIIGTKRTLV FHLGRAPTGE RTEWIMHEYC LNDTSQDSNS MVVCRLRKNN DFRRNNPDKA 180 SSSKVQGSGE DGDGGVGQKV GGESDRLSKN CSSSFDSHSL EQIDSGIEFH RKETSDPALH 240 ESLSREKGNG EDEELYADLL KDDIITLDDN LLSATHNPTP MIMNFSEAEK HTHLPIPTTL 300 PEAEALPFLG NTTRRIKLKK KDHNNVFVNI GLLTFLLIIF IACLHVLCNL

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MESKGKGTMG GVSREAEMSM AALSMFPGFR FSPKDEELIL FYLKKKLQGS DDSVDVISEI  60
EICKFEPWDL PGKSRIPSDN EWFFFSPRGR KYPNGTQNKR ATELGYWKAT GKERNVKSGS  120
EIIGTKRTLV FHLGRAPTGE RTEWIMHEYC LNDTSQDSNS MVVCRLRKNN DFRRNNPDKA  180
SSSKVQGSGE DGDGGVGQKV GGESDRLSKN CSSSFDSHSL EQIDSGIEFH RKETSDPALH  240
ESLSREKGNG EDEELYADLL KDDIITLDDN LLSATHNPTP MIMNFSEAEK HTHLPIPTTL  300
PEAEALPFLG NTTRRIKLKK KDHNNVFVNI GLLTFLLIIF IACLHVLCNL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	314	322	RRIKLKKKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	8e-83	NAC family protein