PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512168.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 107aa    MW: 12039.9 Da    PI: 9.3753
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.51.3e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++++k++G g W++ ++  g+ R++k+c++rw +yl
   XP_023512168.1 14 KGAWTKEEDQRLINYIKLHGEGGWRSLPNAAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MGRSPCCEKQ HTNKGAWTKE EDQRLINYIK LHGEGGWRSL PNAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF TTEENELIVN LHSLLGNKQS GLPYISISIA CLVTSGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.11e-54MYB family protein