PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023512193.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 305aa    MW: 34686.1 Da    PI: 6.5254
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023512193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.51.4e-45111412128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevls 94 
                      pGfrFhPt+eel+ +yLk+ v gk  + ++vi  ++iy+++PwdLp  +k++e+ewyfF++rd+k+    g r+nr+t  gyWkatg+dk++ls
  XP_023512193.1  11 LPGFRFHPTEEELLEFYLKHIVFGKARHSFDVIGFLNIYQHDPWDLPDLAKNGEREWYFFVPRDRKHGgcGGGRPNRTTGIGYWKATGSDKRILS 105
                     59************************9999*****************8889999************9955599********************99 PP

             NAM  95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++l+gl+ktLvfykgrap+g+ktdWvm+eyrl
  XP_023512193.1 106 LsdPKRLIGLRKTLVFYKGRAPRGSKTDWVMNEYRL 141
                     7667788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MADTPHQLGQ LPGFRFHPTE EELLEFYLKH IVFGKARHSF DVIGFLNIYQ HDPWDLPDLA  60
KNGEREWYFF VPRDRKHGGC GGGRPNRTTG IGYWKATGSD KRILSLSDPK RLIGLRKTLV  120
FYKGRAPRGS KTDWVMNEYR LPDNSSLPKD VVLCKIYRKA TSLKVLEQRA VEEETKSLQL  180
NNATTPLMAE EDQDSFNSQI PRLNSSEMVM KKETSCGEYR AEEEEEVDSK GTETETGTGA  240
VGGLLSSSSS SSTSKTGLQI PKGFEMLTDL QVPKMNMDWT QDQFWNQFNS PWLLNFTTPS  300
NILNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.19e-99NAC family protein